Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHGDHO43175 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHGDHO43175 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PHGDHO43175 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PHGDHO43175 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PHGDHO43175 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PHGDHO43175 FZD10-202ENST00000539839 3282 ntBASIC18.34■□□□□ 0.53
PHGDHO43175 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 CRYGFP-201ENST00000418459 633 ntBASIC18.34■□□□□ 0.53
PHGDHO43175 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.34■□□□□ 0.53
PHGDHO43175 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHGDHO43175 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHGDHO43175 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHGDHO43175 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
PHGDHO43175 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.33■□□□□ 0.53
PHGDHO43175 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.33■□□□□ 0.53
PHGDHO43175 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.33■□□□□ 0.53
PHGDHO43175 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.33■□□□□ 0.53
PHGDHO43175 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.33■□□□□ 0.53
PHGDHO43175 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PHGDHO43175 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHGDHO43175 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHGDHO43175 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PHGDHO43175 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.33■□□□□ 0.52
PHGDHO43175 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.33■□□□□ 0.52
PHGDHO43175 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 UBE2SP1-201ENST00000450587 669 ntBASIC18.33■□□□□ 0.52
PHGDHO43175 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PHGDHO43175 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.33■□□□□ 0.52
PHGDHO43175 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PHGDHO43175 MIR4674-201ENST00000582457 87 ntBASIC18.33■□□□□ 0.52
PHGDHO43175 AC233702.5-201ENST00000584107 538 ntBASIC18.33■□□□□ 0.52
PHGDHO43175 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.33■□□□□ 0.52
PHGDHO43175 AL049637.2-201ENST00000641778 930 ntBASIC18.33■□□□□ 0.52
PHGDHO43175 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.33■□□□□ 0.52
PHGDHO43175 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PHGDHO43175 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.33■□□□□ 0.52
PHGDHO43175 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PHGDHO43175 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHGDHO43175 KRT8P50-201ENST00000562022 1438 ntBASIC18.32■□□□□ 0.52
PHGDHO43175 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PHGDHO43175 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PHGDHO43175 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PHGDHO43175 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PHGDHO43175 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PHGDHO43175 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.32■□□□□ 0.52
PHGDHO43175 AC012618.2-201ENST00000428058 849 ntBASIC18.32■□□□□ 0.52
PHGDHO43175 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.32■□□□□ 0.52
PHGDHO43175 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.32■□□□□ 0.52
PHGDHO43175 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.32■□□□□ 0.52
PHGDHO43175 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.32■□□□□ 0.52
PHGDHO43175 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHGDHO43175 LTB4R2-202ENST00000528054 3092 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms