Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UBFD1O14562 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.88■□□□□ 0.45
UBFD1O14562 AC036111.1-201ENST00000533973 1582 ntBASIC17.88■□□□□ 0.45
UBFD1O14562 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.88■□□□□ 0.45
UBFD1O14562 CA15P1-201ENST00000481698 905 ntBASIC17.88■□□□□ 0.45
UBFD1O14562 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.88■□□□□ 0.45
UBFD1O14562 MIR3180-5-201ENST00000583743 153 ntBASIC17.88■□□□□ 0.45
UBFD1O14562 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
UBFD1O14562 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.88■□□□□ 0.45
UBFD1O14562 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.88■□□□□ 0.45
UBFD1O14562 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBFD1O14562 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBFD1O14562 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.87■□□□□ 0.45
UBFD1O14562 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.87■□□□□ 0.45
UBFD1O14562 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.87■□□□□ 0.45
UBFD1O14562 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UBFD1O14562 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UBFD1O14562 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.87■□□□□ 0.45
UBFD1O14562 AC142381.4-202ENST00000563973 229 ntBASIC17.87■□□□□ 0.45
UBFD1O14562 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.87■□□□□ 0.45
UBFD1O14562 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 AL163051.1-201ENST00000569214 1512 ntBASIC17.87■□□□□ 0.45
UBFD1O14562 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UBFD1O14562 FZD10-202ENST00000539839 3282 ntBASIC17.87■□□□□ 0.45
UBFD1O14562 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBFD1O14562 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.86■□□□□ 0.45
UBFD1O14562 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.86■□□□□ 0.45
UBFD1O14562 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
UBFD1O14562 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.86■□□□□ 0.45
UBFD1O14562 CRYGFP-201ENST00000418459 633 ntBASIC17.86■□□□□ 0.45
UBFD1O14562 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.86■□□□□ 0.45
UBFD1O14562 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.86■□□□□ 0.45
UBFD1O14562 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.86■□□□□ 0.45
UBFD1O14562 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.86■□□□□ 0.45
UBFD1O14562 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.86■□□□□ 0.45
UBFD1O14562 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBFD1O14562 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.86■□□□□ 0.45
UBFD1O14562 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.86■□□□□ 0.45
UBFD1O14562 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UBFD1O14562 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBFD1O14562 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBFD1O14562 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UBFD1O14562 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBFD1O14562 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBFD1O14562 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBFD1O14562 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBFD1O14562 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBFD1O14562 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBFD1O14562 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
UBFD1O14562 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBFD1O14562 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms