Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 AP000347.1-202ENST00000435868 847 ntBASIC21.34■■□□□ 1.01
USP17L11C9JVI0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 KRT18P41-201ENST00000518924 1277 ntBASIC21.34■■□□□ 1.01
USP17L11C9JVI0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 AL353801.3-201ENST00000609898 542 ntBASIC21.34■■□□□ 1.01
USP17L11C9JVI0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 AC083906.6-201ENST00000641366 219 ntBASIC21.34■■□□□ 1.01
USP17L11C9JVI0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
USP17L11C9JVI0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.33■■□□□ 1.01
USP17L11C9JVI0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 AP000593.1-201ENST00000393668 712 ntBASIC21.33■■□□□ 1.01
USP17L11C9JVI0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
USP17L11C9JVI0 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.33■■□□□ 1.01
USP17L11C9JVI0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.33■■□□□ 1
USP17L11C9JVI0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP17L11C9JVI0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.33■■□□□ 1
USP17L11C9JVI0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.32■■□□□ 1
USP17L11C9JVI0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.32■■□□□ 1
USP17L11C9JVI0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
USP17L11C9JVI0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.32■■□□□ 1
USP17L11C9JVI0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.32■■□□□ 1
USP17L11C9JVI0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.32■■□□□ 1
USP17L11C9JVI0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.32■■□□□ 1
USP17L11C9JVI0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.32■■□□□ 1
USP17L11C9JVI0 KRT16P4-201ENST00000453883 522 ntBASIC21.32■■□□□ 1
USP17L11C9JVI0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 AP002469.2-201ENST00000531724 424 ntBASIC21.32■■□□□ 1
USP17L11C9JVI0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.32■■□□□ 1
USP17L11C9JVI0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.32■■□□□ 1
USP17L11C9JVI0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.32■■□□□ 1
USP17L11C9JVI0 AL121912.1-201ENST00000603683 238 ntBASIC21.32■■□□□ 1
USP17L11C9JVI0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.32■■□□□ 1
USP17L11C9JVI0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
USP17L11C9JVI0 NSUN5P1-202ENST00000421140 1535 ntBASIC21.32■■□□□ 1
USP17L11C9JVI0 NSUN5P2-203ENST00000457352 1529 ntBASIC21.32■■□□□ 1
USP17L11C9JVI0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.32■■□□□ 1
USP17L11C9JVI0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.32■■□□□ 1
USP17L11C9JVI0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP17L11C9JVI0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.31■■□□□ 1
USP17L11C9JVI0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.31■■□□□ 1
USP17L11C9JVI0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
USP17L11C9JVI0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.31■■□□□ 1
USP17L11C9JVI0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
USP17L11C9JVI0 AL163051.1-201ENST00000569214 1512 ntBASIC21.31■■□□□ 1
USP17L11C9JVI0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP17L11C9JVI0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP17L11C9JVI0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP17L11C9JVI0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP17L11C9JVI0 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.31■■□□□ 1
USP17L11C9JVI0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.31■■□□□ 1
USP17L11C9JVI0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.31■■□□□ 1
USP17L11C9JVI0 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.31■■□□□ 1
USP17L11C9JVI0 AP005901.3-202ENST00000581653 237 ntBASIC21.31■■□□□ 1
USP17L11C9JVI0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.31■■□□□ 1
USP17L11C9JVI0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.31■■□□□ 1
USP17L11C9JVI0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP17L11C9JVI0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
USP17L11C9JVI0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms