Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AP002472.1-201ENST00000577490 586 ntBASIC17.54■□□□□ 0.4
CNOT1A5YKK6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 TSEN15P1-201ENST00000423257 515 ntBASIC17.53■□□□□ 0.4
CNOT1A5YKK6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 MIR1199-201ENST00000621445 119 ntBASIC17.53■□□□□ 0.4
CNOT1A5YKK6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 AC097374.2-201ENST00000618617 1306 ntBASIC17.53■□□□□ 0.4
CNOT1A5YKK6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT1A5YKK6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 KRT18P41-201ENST00000518924 1277 ntBASIC17.52■□□□□ 0.4
CNOT1A5YKK6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT1A5YKK6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT1A5YKK6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 AC120498.9-201ENST00000339021 3867 ntBASIC17.51■□□□□ 0.39
CNOT1A5YKK6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 KRT18P27-201ENST00000427733 1299 ntBASIC17.51■□□□□ 0.39
CNOT1A5YKK6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT1A5YKK6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 AP002414.3-201ENST00000589352 1468 ntBASIC17.5■□□□□ 0.39
CNOT1A5YKK6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 KRT8P50-201ENST00000562022 1438 ntBASIC17.5■□□□□ 0.39
CNOT1A5YKK6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT1A5YKK6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms