Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TCRBV3S1A0A5B6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 AC008687.6-201ENST00000596318 630 ntBASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRBV3S1A0A5B6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRBV3S1A0A5B6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 AP000593.1-201ENST00000393668 712 ntBASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRBV3S1A0A5B6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms