Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 UNC93B5-201ENST00000530315 699 ntBASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 AC120498.8-201ENST00000614275 531 ntBASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-6A0A0B4J262 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 AC009237.14-201ENST00000609975 1594 ntBASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 CD99P1-205ENST00000527459 561 ntBASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 AP003097.1-201ENST00000530657 1135 ntBASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 LINC01126-201ENST00000623515 1646 ntBASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-6A0A0B4J262 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV8-6A0A0B4J262 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV8-6A0A0B4J262 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms