Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb4Q91XZ6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Pcdhb4Q91XZ6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb4Q91XZ6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhb4Q91XZ6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb4Q91XZ6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb4Q91XZ6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb4Q91XZ6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb4Q91XZ6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb4Q91XZ6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhb4Q91XZ6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.47■■□□□ 1.19
Pcdhb4Q91XZ6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb4Q91XZ6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb4Q91XZ6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhb4Q91XZ6 Gm37136-201ENSMUST00000194368 194 ntBASIC22.46■■□□□ 1.19
Pcdhb4Q91XZ6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhb4Q91XZ6 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.45■■□□□ 1.19
Pcdhb4Q91XZ6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.45■■□□□ 1.18
Pcdhb4Q91XZ6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb4Q91XZ6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb4Q91XZ6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb4Q91XZ6 Gm8503-201ENSMUST00000118131 455 ntBASIC22.44■■□□□ 1.18
Pcdhb4Q91XZ6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.44■■□□□ 1.18
Pcdhb4Q91XZ6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb4Q91XZ6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb4Q91XZ6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb4Q91XZ6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb4Q91XZ6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb4Q91XZ6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb4Q91XZ6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb4Q91XZ6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb4Q91XZ6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb4Q91XZ6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Pcdhb4Q91XZ6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb4Q91XZ6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb4Q91XZ6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb4Q91XZ6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb4Q91XZ6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Pcdhb4Q91XZ6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb4Q91XZ6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.38■■□□□ 1.17
Pcdhb4Q91XZ6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb4Q91XZ6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.38■■□□□ 1.17
Pcdhb4Q91XZ6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb4Q91XZ6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb4Q91XZ6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb4Q91XZ6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb4Q91XZ6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhb4Q91XZ6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb4Q91XZ6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhb4Q91XZ6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb4Q91XZ6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb4Q91XZ6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb4Q91XZ6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Pcdhb4Q91XZ6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb4Q91XZ6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb4Q91XZ6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb4Q91XZ6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb4Q91XZ6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhb4Q91XZ6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb4Q91XZ6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb4Q91XZ6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb4Q91XZ6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb4Q91XZ6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb4Q91XZ6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb4Q91XZ6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb4Q91XZ6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Pcdhb4Q91XZ6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb4Q91XZ6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhb4Q91XZ6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb4Q91XZ6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb4Q91XZ6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms