Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhb5Q91XZ5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Pcdhb5Q91XZ5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdhb5Q91XZ5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.24■■□□□ 1.95
Pcdhb5Q91XZ5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhb5Q91XZ5 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.24■■□□□ 1.95
Pcdhb5Q91XZ5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdhb5Q91XZ5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhb5Q91XZ5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdhb5Q91XZ5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.21■■□□□ 1.95
Pcdhb5Q91XZ5 Gm44428-201ENSMUST00000204474 874 ntBASIC27.21■■□□□ 1.95
Pcdhb5Q91XZ5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.21■■□□□ 1.95
Pcdhb5Q91XZ5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhb5Q91XZ5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.18■■□□□ 1.94
Pcdhb5Q91XZ5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Pcdhb5Q91XZ5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhb5Q91XZ5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhb5Q91XZ5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.17■■□□□ 1.94
Pcdhb5Q91XZ5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhb5Q91XZ5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhb5Q91XZ5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Pcdhb5Q91XZ5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhb5Q91XZ5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhb5Q91XZ5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.15■■□□□ 1.94
Pcdhb5Q91XZ5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhb5Q91XZ5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.14■■□□□ 1.94
Pcdhb5Q91XZ5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Pcdhb5Q91XZ5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Pcdhb5Q91XZ5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Pcdhb5Q91XZ5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdhb5Q91XZ5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.13■■□□□ 1.93
Pcdhb5Q91XZ5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Pcdhb5Q91XZ5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdhb5Q91XZ5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
Pcdhb5Q91XZ5 Gm5921-201ENSMUST00000075898 882 ntBASIC27.11■■□□□ 1.93
Pcdhb5Q91XZ5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhb5Q91XZ5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Pcdhb5Q91XZ5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdhb5Q91XZ5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhb5Q91XZ5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Pcdhb5Q91XZ5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Pcdhb5Q91XZ5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhb5Q91XZ5 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.06■■□□□ 1.92
Pcdhb5Q91XZ5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhb5Q91XZ5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.05■■□□□ 1.92
Pcdhb5Q91XZ5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdhb5Q91XZ5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhb5Q91XZ5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhb5Q91XZ5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhb5Q91XZ5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
Pcdhb5Q91XZ5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhb5Q91XZ5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Pcdhb5Q91XZ5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.02■■□□□ 1.92
Pcdhb5Q91XZ5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhb5Q91XZ5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Pcdhb5Q91XZ5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.02■■□□□ 1.92
Pcdhb5Q91XZ5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb5Q91XZ5 Gm5812-201ENSMUST00000061073 957 ntBASIC27■■□□□ 1.91
Pcdhb5Q91XZ5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhb5Q91XZ5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhb5Q91XZ5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhb5Q91XZ5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhb5Q91XZ5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhb5Q91XZ5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb5Q91XZ5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb5Q91XZ5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.98■■□□□ 1.91
Pcdhb5Q91XZ5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb5Q91XZ5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb5Q91XZ5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb5Q91XZ5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb5Q91XZ5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhb5Q91XZ5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Pcdhb5Q91XZ5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhb5Q91XZ5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdhb5Q91XZ5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb5Q91XZ5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb5Q91XZ5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb5Q91XZ5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb5Q91XZ5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Pcdhb5Q91XZ5 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.93■■□□□ 1.9
Pcdhb5Q91XZ5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb5Q91XZ5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.93■■□□□ 1.9
Pcdhb5Q91XZ5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb5Q91XZ5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.92■■□□□ 1.9
Pcdhb5Q91XZ5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdhb5Q91XZ5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdhb5Q91XZ5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Pcdhb5Q91XZ5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Pcdhb5Q91XZ5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Pcdhb5Q91XZ5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Pcdhb5Q91XZ5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhb5Q91XZ5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhb5Q91XZ5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhb5Q91XZ5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms