Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.05■■□□□ 1.12
Rpusd1Q8VCZ8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpusd1Q8VCZ8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpusd1Q8VCZ8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpusd1Q8VCZ8 Gm10420-201ENSMUST00000121713 882 ntBASIC22.04■■□□□ 1.12
Rpusd1Q8VCZ8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rpusd1Q8VCZ8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rpusd1Q8VCZ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rpusd1Q8VCZ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Rpusd1Q8VCZ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rpusd1Q8VCZ8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rpusd1Q8VCZ8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rpusd1Q8VCZ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpusd1Q8VCZ8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rpusd1Q8VCZ8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rpusd1Q8VCZ8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.99■■□□□ 1.11
Rpusd1Q8VCZ8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rpusd1Q8VCZ8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Rpusd1Q8VCZ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rpusd1Q8VCZ8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rpusd1Q8VCZ8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rpusd1Q8VCZ8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.97■■□□□ 1.11
Rpusd1Q8VCZ8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rpusd1Q8VCZ8 Gm44428-201ENSMUST00000204474 874 ntBASIC21.97■■□□□ 1.11
Rpusd1Q8VCZ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rpusd1Q8VCZ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpusd1Q8VCZ8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpusd1Q8VCZ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rpusd1Q8VCZ8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpusd1Q8VCZ8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rpusd1Q8VCZ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rpusd1Q8VCZ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.94■■□□□ 1.1
Rpusd1Q8VCZ8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rpusd1Q8VCZ8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.93■■□□□ 1.1
Rpusd1Q8VCZ8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.93■■□□□ 1.1
Rpusd1Q8VCZ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rpusd1Q8VCZ8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rpusd1Q8VCZ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rpusd1Q8VCZ8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rpusd1Q8VCZ8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rpusd1Q8VCZ8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rpusd1Q8VCZ8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rpusd1Q8VCZ8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.9■■□□□ 1.1
Rpusd1Q8VCZ8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpusd1Q8VCZ8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpusd1Q8VCZ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rpusd1Q8VCZ8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rpusd1Q8VCZ8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Rpusd1Q8VCZ8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Rpusd1Q8VCZ8 Gm5921-201ENSMUST00000075898 882 ntBASIC21.89■■□□□ 1.09
Rpusd1Q8VCZ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Rpusd1Q8VCZ8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpusd1Q8VCZ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpusd1Q8VCZ8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rpusd1Q8VCZ8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rpusd1Q8VCZ8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rpusd1Q8VCZ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.86■■□□□ 1.09
Rpusd1Q8VCZ8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rpusd1Q8VCZ8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpusd1Q8VCZ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rpusd1Q8VCZ8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.85■■□□□ 1.09
Rpusd1Q8VCZ8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rpusd1Q8VCZ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.85■■□□□ 1.09
Rpusd1Q8VCZ8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Rpusd1Q8VCZ8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.84■■□□□ 1.09
Rpusd1Q8VCZ8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rpusd1Q8VCZ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rpusd1Q8VCZ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.84■■□□□ 1.09
Rpusd1Q8VCZ8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rpusd1Q8VCZ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpusd1Q8VCZ8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rpusd1Q8VCZ8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpusd1Q8VCZ8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rpusd1Q8VCZ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpusd1Q8VCZ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.81■■□□□ 1.08
Rpusd1Q8VCZ8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpusd1Q8VCZ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rpusd1Q8VCZ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpusd1Q8VCZ8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpusd1Q8VCZ8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpusd1Q8VCZ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpusd1Q8VCZ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rpusd1Q8VCZ8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpusd1Q8VCZ8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rpusd1Q8VCZ8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpusd1Q8VCZ8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rpusd1Q8VCZ8 Gm5812-201ENSMUST00000061073 957 ntBASIC21.79■■□□□ 1.08
Rpusd1Q8VCZ8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpusd1Q8VCZ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms