Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne2P59108 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cpne2P59108 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpne2P59108 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne2P59108 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne2P59108 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpne2P59108 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpne2P59108 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpne2P59108 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Cpne2P59108 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne2P59108 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne2P59108 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne2P59108 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne2P59108 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne2P59108 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpne2P59108 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne2P59108 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne2P59108 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne2P59108 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpne2P59108 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cpne2P59108 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne2P59108 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cpne2P59108 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpne2P59108 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cpne2P59108 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.93■□□□□ 0.62
Cpne2P59108 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cpne2P59108 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cpne2P59108 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cpne2P59108 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cpne2P59108 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpne2P59108 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne2P59108 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne2P59108 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpne2P59108 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpne2P59108 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpne2P59108 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne2P59108 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne2P59108 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpne2P59108 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Cpne2P59108 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Cpne2P59108 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne2P59108 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne2P59108 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne2P59108 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne2P59108 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cpne2P59108 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpne2P59108 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne2P59108 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cpne2P59108 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne2P59108 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpne2P59108 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne2P59108 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne2P59108 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne2P59108 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Cpne2P59108 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne2P59108 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne2P59108 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpne2P59108 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.87■□□□□ 0.61
Cpne2P59108 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cpne2P59108 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.87■□□□□ 0.61
Cpne2P59108 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpne2P59108 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpne2P59108 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne2P59108 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne2P59108 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpne2P59108 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne2P59108 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne2P59108 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpne2P59108 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne2P59108 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne2P59108 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne2P59108 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpne2P59108 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne2P59108 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne2P59108 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne2P59108 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne2P59108 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne2P59108 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpne2P59108 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpne2P59108 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne2P59108 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne2P59108 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne2P59108 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cpne2P59108 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cpne2P59108 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cpne2P59108 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.82■□□□□ 0.6
Cpne2P59108 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cpne2P59108 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne2P59108 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne2P59108 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne2P59108 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne2P59108 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne2P59108 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpne2P59108 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms