Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 GAK-219ENST00000512325 577 ntTSL 319.2■□□□□ 0.662e-8■■■■■ 29.3
NCBP2P52298 GAK-202ENST00000502656 554 ntTSL 417.93■□□□□ 0.462e-8■■■■■ 29.3
NCBP2P52298 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.122e-8■■■■■ 29.3
NCBP2P52298 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.1□□□□□ -0.152e-8■■■■■ 29.3
NCBP2P52298 GAK-220ENST00000513935 573 ntTSL 212.4□□□□□ -0.422e-8■■■■■ 29.3
NCBP2P52298 IRF3-209ENST00000595034 739 ntTSL 316.82■□□□□ 0.283e-7■■■■■ 29.2
NCBP2P52298 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.02■□□□□ -08e-7■■■■■ 29.2
NCBP2P52298 AKAP9-216ENST00000619023 6006 ntTSL 5 BASIC11.11□□□□□ -0.638e-7■■■■■ 29.2
NCBP2P52298 AKAP9-214ENST00000493453 6020 ntTSL 28.75□□□□□ -1.018e-7■■■■■ 29.2
NCBP2P52298 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.618e-7■■■■■ 29.2
NCBP2P52298 EP400NL-205ENST00000443539 1756 ntTSL 221.49■■□□□ 1.034e-7■■■■■ 29.1
NCBP2P52298 EP400NL-202ENST00000389560 1726 ntTSL 1 (best)20.79■□□□□ 0.924e-7■■■■■ 29.1
NCBP2P52298 EP400NL-207ENST00000454179 781 ntTSL 217.25■□□□□ 0.354e-7■■■■■ 29.1
NCBP2P52298 EP400NL-210ENST00000537558 861 ntTSL 416.83■□□□□ 0.284e-7■■■■■ 29.1
NCBP2P52298 EP400NL-209ENST00000488030 1366 ntTSL 216.22■□□□□ 0.194e-7■■■■■ 29.1
NCBP2P52298 EP400NL-212ENST00000539351 564 ntTSL 414.89□□□□□ -0.034e-7■■■■■ 29.1
NCBP2P52298 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.15□□□□□ -0.34e-7■■■■■ 29.1
NCBP2P52298 KYAT1-206ENST00000451800 847 ntTSL 518.64■□□□□ 0.576e-16■■■■■ 29.1
NCBP2P52298 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.55□□□□□ -0.086e-16■■■■■ 29.1
NCBP2P52298 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.38□□□□□ -0.276e-16■■■■■ 29.1
NCBP2P52298 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.346e-16■■■■■ 29.1
NCBP2P52298 KYAT1-207ENST00000462722 2089 ntTSL 1 (best)12.09□□□□□ -0.476e-16■■■■■ 29.1
NCBP2P52298 KYAT1-209ENST00000474824 618 ntTSL 311.95□□□□□ -0.56e-16■■■■■ 29.1
NCBP2P52298 WDR73-215ENST00000560182 542 ntTSL 420.3■□□□□ 0.842e-7■■■■■ 29
NCBP2P52298 WDR73-208ENST00000559126 2031 ntTSL 218.2■□□□□ 0.52e-7■■■■■ 29
NCBP2P52298 WDR73-210ENST00000559224 788 ntTSL 515.87■□□□□ 0.132e-7■■■■■ 29
NCBP2P52298 WDR73-205ENST00000558521 997 ntTSL 315.87■□□□□ 0.132e-7■■■■■ 29
NCBP2P52298 WDR73-213ENST00000559994 2063 ntTSL 514.54□□□□□ -0.082e-7■■■■■ 29
NCBP2P52298 WDR73-207ENST00000559015 2140 ntTSL 214.39□□□□□ -0.112e-7■■■■■ 29
NCBP2P52298 WDR73-211ENST00000559452 1240 ntTSL 313.84□□□□□ -0.192e-7■■■■■ 29
NCBP2P52298 WDR73-201ENST00000398528 1915 ntTSL 1 (best)12.99□□□□□ -0.332e-7■■■■■ 29
NCBP2P52298 WDR73-218ENST00000560966 5071 ntTSL 212.69□□□□□ -0.382e-7■■■■■ 29
NCBP2P52298 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.42e-7■■■■■ 29
NCBP2P52298 WDR73-220ENST00000561434 582 ntTSL 410.75□□□□□ -0.692e-7■■■■■ 29
NCBP2P52298 WDR73-219ENST00000561329 1007 ntTSL 210.18□□□□□ -0.782e-7■■■■■ 29
NCBP2P52298 WDR73-217ENST00000560835 582 ntTSL 28.78□□□□□ -12e-7■■■■■ 29
NCBP2P52298 WDR73-203ENST00000558019 528 ntTSL 48.78□□□□□ -12e-7■■■■■ 29
NCBP2P52298 WDR73-209ENST00000559178 933 ntTSL 38.55□□□□□ -1.042e-7■■■■■ 29
NCBP2P52298 WDR73-221ENST00000561447 560 ntTSL 48.11□□□□□ -1.112e-7■■■■■ 29
NCBP2P52298 WDR73-216ENST00000560252 1180 ntTSL 27.67□□□□□ -1.182e-7■■■■■ 29
NCBP2P52298 FKBP2-204ENST00000535135 639 ntTSL 322.69■■□□□ 1.223e-8■■■■■ 29
NCBP2P52298 RNF170-201ENST00000240159 2023 ntTSL 221.43■■□□□ 1.023e-8■■■■■ 29
NCBP2P52298 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.523e-8■■■■■ 29
NCBP2P52298 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.413e-8■■■■■ 29
NCBP2P52298 FKBP2-205ENST00000536642 637 ntTSL 217.29■□□□□ 0.363e-8■■■■■ 29
NCBP2P52298 RNF170-207ENST00000528318 1169 ntTSL 217.24■□□□□ 0.353e-8■■■■■ 29
NCBP2P52298 FKBP2-206ENST00000541388 705 ntTSL 517.11■□□□□ 0.333e-8■■■■■ 29
NCBP2P52298 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.23e-8■■■■■ 29
NCBP2P52298 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.07■□□□□ 03e-8■■■■■ 29
NCBP2P52298 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.023e-8■■■■■ 29
NCBP2P52298 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.163e-8■■■■■ 29
NCBP2P52298 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.253e-8■■■■■ 29
NCBP2P52298 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.74□□□□□ -0.373e-8■■■■■ 29
NCBP2P52298 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.413e-8■■■■■ 29
NCBP2P52298 EPS8L3-204ENST00000472325 1806 ntTSL 1 (best)12.29□□□□□ -0.443e-8■■■■■ 29
NCBP2P52298 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.453e-8■■■■■ 29
NCBP2P52298 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.543e-8■■■■■ 29
NCBP2P52298 RNF170-208ENST00000531440 580 ntTSL 411.42□□□□□ -0.583e-8■■■■■ 29
NCBP2P52298 RNF170-203ENST00000319104 1866 ntTSL 1 (best) BASIC11.36□□□□□ -0.593e-8■■■■■ 29
NCBP2P52298 EPS8L3-206ENST00000477568 493 ntTSL 410.91□□□□□ -0.663e-8■■■■■ 29
NCBP2P52298 RNF170-204ENST00000524954 195 ntTSL 59.68□□□□□ -0.863e-8■■■■■ 29
NCBP2P52298 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC9.1□□□□□ -0.953e-8■■■■■ 29
NCBP2P52298 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.333e-8■■■■■ 29
NCBP2P52298 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.43e-8■■■■■ 29
NCBP2P52298 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.553e-8■■■■■ 29
NCBP2P52298 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.33□□□□□ -1.563e-8■■■■■ 29
NCBP2P52298 DDX46-206ENST00000507053 530 ntTSL 43.66□□□□□ -1.823e-8■■■■■ 29
NCBP2P52298 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.07□□□□□ -0.961e-7■■■■■ 28.9
NCBP2P52298 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.8□□□□□ -1.644e-8■■■■■ 28.9
NCBP2P52298 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.44□□□□□ -0.424e-7■■■■■ 28.8
NCBP2P52298 PUM2-210ENST00000442400 955 ntTSL 57.97□□□□□ -1.134e-7■■■■■ 28.8
NCBP2P52298 PUM2-205ENST00000420234 562 ntTSL 54.37□□□□□ -1.714e-7■■■■■ 28.8
NCBP2P52298 PUM2-208ENST00000432105 584 ntTSL 53.53□□□□□ -1.844e-7■■■■■ 28.8
NCBP2P52298 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.812e-7■■■■■ 28.8
NCBP2P52298 PPP2R5E-203ENST00000553266 1690 ntTSL 1 (best)18.12■□□□□ 0.492e-7■■■■■ 28.8
NCBP2P52298 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.272e-7■■■■■ 28.8
NCBP2P52298 PPP2R5E-207ENST00000556878 3371 ntTSL 1 (best)12.13□□□□□ -0.472e-7■■■■■ 28.8
NCBP2P52298 RPL22-204ENST00000465387 508 ntTSL 219.93■□□□□ 0.782e-8■■■■■ 28.8
NCBP2P52298 RPL22-206ENST00000480661 2279 ntTSL 1 (best)19.26■□□□□ 0.672e-8■■■■■ 28.8
NCBP2P52298 RPL22-203ENST00000465335 806 ntTSL 315.09■□□□□ 0.012e-8■■■■■ 28.8
NCBP2P52298 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.772e-8■■■■■ 28.8
NCBP2P52298 RPL22-202ENST00000462296 600 ntTSL 37.8□□□□□ -1.162e-8■■■■■ 28.8
NCBP2P52298 RPL22-208ENST00000497965 786 ntTSL 2 BASIC6.98□□□□□ -1.292e-8■■■■■ 28.8
NCBP2P52298 RPL22-205ENST00000471204 524 ntTSL 24.24□□□□□ -1.732e-8■■■■■ 28.8
NCBP2P52298 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.48■□□□□ 0.077e-7■■■■■ 28.8
NCBP2P52298 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.017e-7■■■■■ 28.8
NCBP2P52298 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.3□□□□□ -0.127e-7■■■■■ 28.8
NCBP2P52298 PPP1R21-203ENST00000416913 3208 ntTSL 213.51□□□□□ -0.257e-7■■■■■ 28.8
NCBP2P52298 PPP1R21-205ENST00000431614 2481 ntTSL 59.2□□□□□ -0.947e-7■■■■■ 28.8
NCBP2P52298 BRD4-208ENST00000597315 892 ntTSL 524.81■■□□□ 1.566e-7■■■■■ 28.7
NCBP2P52298 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.32■■□□□ 1.166e-7■■■■■ 28.7
NCBP2P52298 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.656e-7■■■■■ 28.7
NCBP2P52298 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.84□□□□□ -0.351e-7■■■■■ 28.7
NCBP2P52298 INTS8-204ENST00000519457 581 ntTSL 522.97■■□□□ 1.272e-8■■■■■ 28.7
NCBP2P52298 MTMR14-209ENST00000437997 718 ntTSL 322.63■■□□□ 1.212e-8■■■■■ 28.7
NCBP2P52298 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 12e-8■■■■■ 28.7
NCBP2P52298 INTS8-203ENST00000519053 569 ntTSL 421.2■□□□□ 0.982e-8■■■■■ 28.7
NCBP2P52298 MTMR14-205ENST00000416864 840 ntTSL 521.06■□□□□ 0.962e-8■■■■■ 28.7
NCBP2P52298 MTMR14-210ENST00000447144 1664 ntTSL 220.78■□□□□ 0.922e-8■■■■■ 28.7
NCBP2P52298 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.882e-8■■■■■ 28.7
Retrieved 100 of 18,329 protein–RNA pairs in 242.6 ms