Protein–RNA interactions for Protein: P41155

Ltb, Lymphotoxin-beta, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbP41155 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LtbP41155 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LtbP41155 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LtbP41155 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LtbP41155 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LtbP41155 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LtbP41155 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LtbP41155 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LtbP41155 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.55■□□□□ 0.72
LtbP41155 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LtbP41155 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LtbP41155 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.55■□□□□ 0.72
LtbP41155 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtbP41155 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
LtbP41155 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LtbP41155 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.54■□□□□ 0.72
LtbP41155 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.54■□□□□ 0.72
LtbP41155 Scarna2-201ENSMUST00000157560 414 ntBASIC19.54■□□□□ 0.72
LtbP41155 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LtbP41155 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LtbP41155 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LtbP41155 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LtbP41155 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LtbP41155 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LtbP41155 Gm4799-201ENSMUST00000095396 657 ntBASIC19.52■□□□□ 0.72
LtbP41155 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LtbP41155 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LtbP41155 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LtbP41155 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LtbP41155 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LtbP41155 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LtbP41155 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LtbP41155 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LtbP41155 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LtbP41155 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LtbP41155 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LtbP41155 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.5■□□□□ 0.71
LtbP41155 Gm9806-201ENSMUST00000051080 552 ntBASIC19.5■□□□□ 0.71
LtbP41155 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LtbP41155 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LtbP41155 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LtbP41155 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.49■□□□□ 0.71
LtbP41155 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LtbP41155 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LtbP41155 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LtbP41155 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LtbP41155 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LtbP41155 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbP41155 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.48■□□□□ 0.71
LtbP41155 Gm11687-201ENSMUST00000118911 886 ntBASIC19.48■□□□□ 0.71
LtbP41155 Gm37136-201ENSMUST00000194368 194 ntBASIC19.48■□□□□ 0.71
LtbP41155 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LtbP41155 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.48■□□□□ 0.71
LtbP41155 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LtbP41155 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LtbP41155 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LtbP41155 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbP41155 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.47■□□□□ 0.71
LtbP41155 Mir3960-201ENSMUST00000198213 73 ntBASIC19.47■□□□□ 0.71
LtbP41155 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbP41155 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LtbP41155 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbP41155 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbP41155 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LtbP41155 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LtbP41155 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbP41155 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbP41155 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbP41155 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LtbP41155 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbP41155 Gm16437-201ENSMUST00000025669 507 ntBASIC19.45■□□□□ 0.7
LtbP41155 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LtbP41155 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LtbP41155 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbP41155 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.44■□□□□ 0.7
LtbP41155 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LtbP41155 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LtbP41155 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LtbP41155 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.43■□□□□ 0.7
LtbP41155 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.43■□□□□ 0.7
LtbP41155 Gm12366-201ENSMUST00000121722 873 ntBASIC19.43■□□□□ 0.7
LtbP41155 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.43■□□□□ 0.7
LtbP41155 Gm45364-201ENSMUST00000210883 159 ntBASIC19.43■□□□□ 0.7
LtbP41155 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.43■□□□□ 0.7
LtbP41155 Gm5786-201ENSMUST00000085368 882 ntBASIC19.43■□□□□ 0.7
LtbP41155 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LtbP41155 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LtbP41155 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LtbP41155 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.43■□□□□ 0.7
LtbP41155 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LtbP41155 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LtbP41155 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LtbP41155 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LtbP41155 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.42■□□□□ 0.7
LtbP41155 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LtbP41155 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LtbP41155 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LtbP41155 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LtbP41155 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LtbP41155 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms