Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.18■■□□□ 1.62
Mtco1P00397 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Mtco1P00397 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.17■■□□□ 1.62
Mtco1P00397 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mtco1P00397 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Mtco1P00397 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mtco1P00397 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.17■■□□□ 1.62
Mtco1P00397 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.15■■□□□ 1.62
Mtco1P00397 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Mtco1P00397 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.15■■□□□ 1.62
Mtco1P00397 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Mtco1P00397 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Mtco1P00397 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.14■■□□□ 1.62
Mtco1P00397 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Mtco1P00397 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Mtco1P00397 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Mtco1P00397 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Mtco1P00397 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Mtco1P00397 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Mtco1P00397 Gm10420-201ENSMUST00000121713 882 ntBASIC25.1■■□□□ 1.61
Mtco1P00397 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
Mtco1P00397 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.08■■□□□ 1.61
Mtco1P00397 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Mtco1P00397 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.08■■□□□ 1.61
Mtco1P00397 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Mtco1P00397 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
Mtco1P00397 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Mtco1P00397 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Mtco1P00397 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Mtco1P00397 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Mtco1P00397 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Mtco1P00397 Gm44428-201ENSMUST00000204474 874 ntBASIC25.03■■□□□ 1.6
Mtco1P00397 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Mtco1P00397 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Mtco1P00397 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Mtco1P00397 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25■■□□□ 1.59
Mtco1P00397 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25■■□□□ 1.59
Mtco1P00397 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Mtco1P00397 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.99■■□□□ 1.59
Mtco1P00397 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.99■■□□□ 1.59
Mtco1P00397 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Mtco1P00397 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mtco1P00397 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mtco1P00397 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mtco1P00397 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Mtco1P00397 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.98■■□□□ 1.59
Mtco1P00397 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Mtco1P00397 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Mtco1P00397 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.98■■□□□ 1.59
Mtco1P00397 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Mtco1P00397 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.98■■□□□ 1.59
Mtco1P00397 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Mtco1P00397 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Mtco1P00397 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Mtco1P00397 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Mtco1P00397 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mtco1P00397 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mtco1P00397 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mtco1P00397 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Mtco1P00397 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Mtco1P00397 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Mtco1P00397 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Mtco1P00397 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Mtco1P00397 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.94■■□□□ 1.58
Mtco1P00397 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Mtco1P00397 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Mtco1P00397 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Mtco1P00397 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
Mtco1P00397 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Mtco1P00397 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Mtco1P00397 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Mtco1P00397 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Mtco1P00397 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Mtco1P00397 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Mtco1P00397 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.9■■□□□ 1.58
Mtco1P00397 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Mtco1P00397 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.89■■□□□ 1.58
Mtco1P00397 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Mtco1P00397 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Mtco1P00397 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms