Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.94■■■□□ 2.06
Ube4aE9Q735 Gm10420-201ENSMUST00000121713 882 ntBASIC27.94■■■□□ 2.06
Ube4aE9Q735 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Ube4aE9Q735 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ube4aE9Q735 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.93■■■□□ 2.06
Ube4aE9Q735 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Ube4aE9Q735 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ube4aE9Q735 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Ube4aE9Q735 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ube4aE9Q735 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ube4aE9Q735 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.91■■■□□ 2.06
Ube4aE9Q735 Gm44428-201ENSMUST00000204474 874 ntBASIC27.91■■■□□ 2.06
Ube4aE9Q735 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ube4aE9Q735 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ube4aE9Q735 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Ube4aE9Q735 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ube4aE9Q735 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ube4aE9Q735 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.88■■■□□ 2.05
Ube4aE9Q735 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ube4aE9Q735 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ube4aE9Q735 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ube4aE9Q735 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.84■■■□□ 2.05
Ube4aE9Q735 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
Ube4aE9Q735 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ube4aE9Q735 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ube4aE9Q735 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ube4aE9Q735 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ube4aE9Q735 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ube4aE9Q735 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ube4aE9Q735 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ube4aE9Q735 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ube4aE9Q735 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.79■■■□□ 2.04
Ube4aE9Q735 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ube4aE9Q735 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ube4aE9Q735 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ube4aE9Q735 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ube4aE9Q735 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ube4aE9Q735 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ube4aE9Q735 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Ube4aE9Q735 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ube4aE9Q735 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Ube4aE9Q735 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.74■■■□□ 2.03
Ube4aE9Q735 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Ube4aE9Q735 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.73■■■□□ 2.03
Ube4aE9Q735 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.73■■■□□ 2.03
Ube4aE9Q735 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Ube4aE9Q735 Gm5921-201ENSMUST00000075898 882 ntBASIC27.73■■■□□ 2.03
Ube4aE9Q735 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Ube4aE9Q735 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ube4aE9Q735 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Ube4aE9Q735 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ube4aE9Q735 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Ube4aE9Q735 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ube4aE9Q735 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.69■■■□□ 2.02
Ube4aE9Q735 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ube4aE9Q735 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ube4aE9Q735 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ube4aE9Q735 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ube4aE9Q735 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ube4aE9Q735 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ube4aE9Q735 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ube4aE9Q735 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ube4aE9Q735 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ube4aE9Q735 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ube4aE9Q735 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Ube4aE9Q735 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ube4aE9Q735 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.64■■■□□ 2.02
Ube4aE9Q735 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.64■■■□□ 2.02
Ube4aE9Q735 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ube4aE9Q735 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ube4aE9Q735 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Ube4aE9Q735 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ube4aE9Q735 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ube4aE9Q735 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ube4aE9Q735 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.61■■■□□ 2.01
Ube4aE9Q735 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ube4aE9Q735 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ube4aE9Q735 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ube4aE9Q735 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms