Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trbc1A0A0A6YWV4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbc1A0A0A6YWV4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbc1A0A0A6YWV4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trbc1A0A0A6YWV4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbc1A0A0A6YWV4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbc1A0A0A6YWV4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.78■□□□□ 0.92
Trbc1A0A0A6YWV4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbc1A0A0A6YWV4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbc1A0A0A6YWV4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbc1A0A0A6YWV4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbc1A0A0A6YWV4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.77■□□□□ 0.92
Trbc1A0A0A6YWV4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.77■□□□□ 0.92
Trbc1A0A0A6YWV4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.77■□□□□ 0.92
Trbc1A0A0A6YWV4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trbc1A0A0A6YWV4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbc1A0A0A6YWV4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.76■□□□□ 0.91
Trbc1A0A0A6YWV4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trbc1A0A0A6YWV4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trbc1A0A0A6YWV4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trbc1A0A0A6YWV4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbc1A0A0A6YWV4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trbc1A0A0A6YWV4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbc1A0A0A6YWV4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbc1A0A0A6YWV4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbc1A0A0A6YWV4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbc1A0A0A6YWV4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbc1A0A0A6YWV4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbc1A0A0A6YWV4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Gm9812-201ENSMUST00000061934 968 ntBASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trbc1A0A0A6YWV4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbc1A0A0A6YWV4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbc1A0A0A6YWV4 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.71■□□□□ 0.91
Trbc1A0A0A6YWV4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbc1A0A0A6YWV4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trbc1A0A0A6YWV4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trbc1A0A0A6YWV4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
Trbc1A0A0A6YWV4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.69■□□□□ 0.9
Trbc1A0A0A6YWV4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbc1A0A0A6YWV4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trbc1A0A0A6YWV4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbc1A0A0A6YWV4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbc1A0A0A6YWV4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbc1A0A0A6YWV4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trbc1A0A0A6YWV4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbc1A0A0A6YWV4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trbc1A0A0A6YWV4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trbc1A0A0A6YWV4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trbc1A0A0A6YWV4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trbc1A0A0A6YWV4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trbc1A0A0A6YWV4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbc1A0A0A6YWV4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.65■□□□□ 0.9
Trbc1A0A0A6YWV4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Trbc1A0A0A6YWV4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trbc1A0A0A6YWV4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trbc1A0A0A6YWV4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.63■□□□□ 0.89
Trbc1A0A0A6YWV4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trbc1A0A0A6YWV4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trbc1A0A0A6YWV4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.63■□□□□ 0.89
Trbc1A0A0A6YWV4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbc1A0A0A6YWV4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Scarna2-201ENSMUST00000157560 414 ntBASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbc1A0A0A6YWV4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbc1A0A0A6YWV4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trbc1A0A0A6YWV4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbc1A0A0A6YWV4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trbc1A0A0A6YWV4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trbc1A0A0A6YWV4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms