Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH9Q9ULB4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 Z83836.1-201ENST00000624605 1642 ntBASIC19.45■□□□□ 0.7
CDH9Q9ULB4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 IGHGP-201ENST00000390555 1178 ntBASIC19.45■□□□□ 0.7
CDH9Q9ULB4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 GPR32P1-201ENST00000601788 811 ntBASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AL390719.2-201ENST00000606993 987 ntBASIC19.45■□□□□ 0.7
CDH9Q9ULB4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH9Q9ULB4 AC016734.2-201ENST00000624325 1377 ntBASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 ATP5G2P1-201ENST00000433580 426 ntBASIC19.44■□□□□ 0.7
CDH9Q9ULB4 TSSC2-201ENST00000450217 709 ntBASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC099343.3-201ENST00000605834 2503 ntBASIC19.44■□□□□ 0.7
CDH9Q9ULB4 AC098818.2-201ENST00000564925 2320 ntBASIC19.43■□□□□ 0.7
CDH9Q9ULB4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.43■□□□□ 0.7
CDH9Q9ULB4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 AL024508.2-201ENST00000607749 1894 ntBASIC19.43■□□□□ 0.7
CDH9Q9ULB4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH9Q9ULB4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH9Q9ULB4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms