Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 KRT18P58-201ENST00000527480 1120 ntBASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 AC010240.3-201ENST00000607688 395 ntBASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 AL592071.1-201ENST00000611956 408 ntBASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.61■□□□□ 0.89
PDLIM7Q9NR12 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 NUS1P2-201ENST00000417358 873 ntBASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDLIM7Q9NR12 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 NSUN5P1-202ENST00000421140 1535 ntBASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 NSUN5P2-203ENST00000457352 1529 ntBASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 KRT8P50-201ENST00000562022 1438 ntBASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDLIM7Q9NR12 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 AP005901.3-202ENST00000581653 237 ntBASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 GPR32P1-201ENST00000601788 811 ntBASIC20.58■□□□□ 0.89
PDLIM7Q9NR12 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM7Q9NR12 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM7Q9NR12 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PDLIM7Q9NR12 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms