Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AP001412.1-201ENST00000608405 714 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC008764.6-201ENST00000595909 2069 ntBASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.76■□□□□ 0.43
LRTM1Q9HBL6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 AC012618.2-201ENST00000428058 849 ntBASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 CA15P1-201ENST00000481698 905 ntBASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 AC113410.3-201ENST00000623366 203 ntBASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRTM1Q9HBL6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CRYGFP-201ENST00000418459 633 ntBASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 GCSHP5-201ENST00000443090 522 ntBASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 AC233702.5-201ENST00000584107 538 ntBASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRTM1Q9HBL6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 KRT8P50-201ENST00000562022 1438 ntBASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 REXO1L10P-201ENST00000615707 1290 ntBASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 REXO1L12P-201ENST00000622156 912 ntBASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 AL049637.2-201ENST00000641778 930 ntBASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms