Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 MRPL3P1-201ENST00000400109 1033 ntBASIC19.03■□□□□ 0.64
BRD9Q9H8M2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.03■□□□□ 0.64
BRD9Q9H8M2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 NSUN5P1-202ENST00000421140 1535 ntBASIC19.02■□□□□ 0.64
BRD9Q9H8M2 NSUN5P2-203ENST00000457352 1529 ntBASIC19.02■□□□□ 0.64
BRD9Q9H8M2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRD9Q9H8M2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.02■□□□□ 0.63
BRD9Q9H8M2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
BRD9Q9H8M2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.02■□□□□ 0.63
BRD9Q9H8M2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.02■□□□□ 0.63
BRD9Q9H8M2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.02■□□□□ 0.63
BRD9Q9H8M2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.02■□□□□ 0.63
BRD9Q9H8M2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 NUS1P2-201ENST00000417358 873 ntBASIC19.01■□□□□ 0.63
BRD9Q9H8M2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 RN7SL606P-201ENST00000472779 293 ntBASIC19.01■□□□□ 0.63
BRD9Q9H8M2 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 AL353692.3-201ENST00000407031 1396 ntBASIC19.01■□□□□ 0.63
BRD9Q9H8M2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRD9Q9H8M2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRD9Q9H8M2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRD9Q9H8M2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
BRD9Q9H8M2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
BRD9Q9H8M2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRD9Q9H8M2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19■□□□□ 0.63
BRD9Q9H8M2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRD9Q9H8M2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19■□□□□ 0.63
BRD9Q9H8M2 SAPCD2P3-201ENST00000455031 850 ntBASIC19■□□□□ 0.63
BRD9Q9H8M2 MINOS1P3-201ENST00000457048 203 ntBASIC19■□□□□ 0.63
BRD9Q9H8M2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19■□□□□ 0.63
BRD9Q9H8M2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19■□□□□ 0.63
BRD9Q9H8M2 AC004263.2-201ENST00000617183 678 ntBASIC19■□□□□ 0.63
BRD9Q9H8M2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19■□□□□ 0.63
BRD9Q9H8M2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms