Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF38Q9H0F5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 MIR149-201ENST00000384879 89 ntBASIC19.08■□□□□ 0.64
RNF38Q9H0F5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 AC090616.6-201ENST00000582640 721 ntBASIC19.08■□□□□ 0.64
RNF38Q9H0F5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 IGHV3-41-201ENST00000613121 348 ntBASIC19.08■□□□□ 0.64
RNF38Q9H0F5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 KRT89P-201ENST00000620027 1478 ntBASIC19.08■□□□□ 0.64
RNF38Q9H0F5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF38Q9H0F5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LINC00265-3P-201ENST00000447588 903 ntBASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 AC009102.3-201ENST00000623118 1491 ntBASIC19.07■□□□□ 0.64
RNF38Q9H0F5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 AC112777.1-201ENST00000540175 1423 ntBASIC19.07■□□□□ 0.64
RNF38Q9H0F5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF38Q9H0F5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 AL353692.3-201ENST00000407031 1396 ntBASIC19.06■□□□□ 0.64
RNF38Q9H0F5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 PRELID1P1-202ENST00000567272 903 ntBASIC19.06■□□□□ 0.64
RNF38Q9H0F5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF38Q9H0F5 AC005082.1-201ENST00000413042 2259 ntBASIC19.05■□□□□ 0.64
RNF38Q9H0F5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF38Q9H0F5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms