Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AP000864.1-201ENST00000609424 650 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AC010205.1-201ENST00000616668 449 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AC015726.3-201ENST00000624501 418 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AC025268.1-201ENST00000632192 1199 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 Y_RNA.303-201ENST00000364998 94 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AL356131.1-201ENST00000405826 414 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC092638.1-201ENST00000411966 1275 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 MTTP-202ENST00000422897 1155 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AL591212.2-201ENST00000433923 257 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC245452.2-201ENST00000435222 392 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 RPS15AP29-201ENST00000445539 400 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 RPL5P14-201ENST00000494197 878 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 FCF1P3-201ENST00000496394 590 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 FGB-207ENST00000509493 1164 ntTSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC108103.1-201ENST00000511286 446 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 RPL12P22-201ENST00000519073 490 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC244502.2-201ENST00000543361 851 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC016144.1-201ENST00000548175 1087 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 FGF7P1-201ENST00000582820 288 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 MIR3960-201ENST00000583311 91 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC087045.2-201ENST00000606279 1003 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC131159.1-201ENST00000621854 213 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC090099.1-204ENST00000623626 849 ntBASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 AC027369.1-201ENST00000640698 1105 ntTSL 5 BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
KRTAP3-3Q9BYR6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 CDY5P-201ENST00000411487 1580 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 CDY9P-201ENST00000451397 1580 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 C9orf163-202ENST00000624034 2573 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 YEATS4-201ENST00000247843 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 CPEB4-203ENST00000517880 1416 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 FO393409.1-201ENST00000399325 1372 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 Y_RNA.77-201ENST00000362962 107 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 OR1F12-201ENST00000402365 945 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AC007036.2-201ENST00000415934 437 ntTSL 3 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 BX664727.1-201ENST00000416024 466 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 OR7E36P-201ENST00000419933 954 ntBASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC00582-201ENST00000448058 597 ntTSL 2 BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
KRTAP3-3Q9BYR6 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms