Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LITAFQ99732 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LITAFQ99732 AGGF1P2-201ENST00000426656 2106 ntBASIC12.28□□□□□ -0.44
LITAFQ99732 KRT18P55-202ENST00000578578 1546 ntBASIC12.28□□□□□ -0.44
LITAFQ99732 CROCCP2-202ENST00000412962 2773 ntBASIC12.28□□□□□ -0.44
LITAFQ99732 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LITAFQ99732 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.28□□□□□ -0.44
LITAFQ99732 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 DOC2GP-204ENST00000639052 2548 ntBASIC12.28□□□□□ -0.44
LITAFQ99732 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 AL390719.1-204ENST00000412397 1219 ntBASIC12.28□□□□□ -0.44
LITAFQ99732 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.28□□□□□ -0.44
LITAFQ99732 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.28□□□□□ -0.44
LITAFQ99732 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
LITAFQ99732 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LITAFQ99732 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LITAFQ99732 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LITAFQ99732 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.27□□□□□ -0.45
LITAFQ99732 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
LITAFQ99732 CYP2T1P-201ENST00000432607 1285 ntBASIC12.27□□□□□ -0.45
LITAFQ99732 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LITAFQ99732 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.27□□□□□ -0.45
LITAFQ99732 AC005829.2-201ENST00000571422 1056 ntBASIC12.27□□□□□ -0.45
LITAFQ99732 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
LITAFQ99732 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.27□□□□□ -0.45
LITAFQ99732 AC069236.1-201ENST00000604339 616 ntBASIC12.27□□□□□ -0.45
LITAFQ99732 RAB43-208ENST00000615093 783 ntTSL 5 BASIC12.27□□□□□ -0.45
LITAFQ99732 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC12.27□□□□□ -0.45
LITAFQ99732 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.27□□□□□ -0.45
LITAFQ99732 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LITAFQ99732 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.27□□□□□ -0.45
LITAFQ99732 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LITAFQ99732 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 AC106886.4-201ENST00000623557 2502 ntBASIC12.27□□□□□ -0.45
LITAFQ99732 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LITAFQ99732 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 AL355312.1-201ENST00000407115 2176 ntBASIC12.26□□□□□ -0.45
LITAFQ99732 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.26□□□□□ -0.45
LITAFQ99732 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LITAFQ99732 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC12.26□□□□□ -0.45
LITAFQ99732 RPS2P52-201ENST00000469610 820 ntBASIC12.26□□□□□ -0.45
LITAFQ99732 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.26□□□□□ -0.45
LITAFQ99732 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.26□□□□□ -0.45
LITAFQ99732 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC12.26□□□□□ -0.45
LITAFQ99732 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.26□□□□□ -0.45
LITAFQ99732 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms