Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC055717.3-201ENST00000622967 595 ntBASIC19.65■□□□□ 0.74
RAD9AQ99638 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.65■□□□□ 0.74
RAD9AQ99638 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD9AQ99638 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.65■□□□□ 0.74
RAD9AQ99638 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAD9AQ99638 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAD9AQ99638 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.65■□□□□ 0.74
RAD9AQ99638 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAD9AQ99638 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
RAD9AQ99638 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAD9AQ99638 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.65■□□□□ 0.74
RAD9AQ99638 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAD9AQ99638 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
RAD9AQ99638 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAD9AQ99638 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.64■□□□□ 0.74
RAD9AQ99638 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAD9AQ99638 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.64■□□□□ 0.73
RAD9AQ99638 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.64■□□□□ 0.73
RAD9AQ99638 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.64■□□□□ 0.73
RAD9AQ99638 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.64■□□□□ 0.73
RAD9AQ99638 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAD9AQ99638 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.64■□□□□ 0.73
RAD9AQ99638 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 INTS4P1-201ENST00000438455 1935 ntBASIC19.64■□□□□ 0.73
RAD9AQ99638 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.64■□□□□ 0.73
RAD9AQ99638 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAD9AQ99638 AIRN-201ENST00000601203 4374 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RAD9AQ99638 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 AC141586.3-201ENST00000562166 1838 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 AP005117.1-201ENST00000584346 1413 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.63■□□□□ 0.73
RAD9AQ99638 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 UPF3AP3-201ENST00000420996 769 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 AL591424.1-201ENST00000442569 1213 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.63■□□□□ 0.73
RAD9AQ99638 AC021087.4-201ENST00000563761 564 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 AL356488.2-201ENST00000602755 427 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 AC140113.2-201ENST00000604370 208 ntBASIC19.63■□□□□ 0.73
RAD9AQ99638 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAD9AQ99638 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAD9AQ99638 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 HEIH-201ENST00000623091 1652 ntBASIC19.62■□□□□ 0.73
RAD9AQ99638 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.62■□□□□ 0.73
RAD9AQ99638 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RAD9AQ99638 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RAD9AQ99638 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RAD9AQ99638 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.62■□□□□ 0.73
RAD9AQ99638 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.62■□□□□ 0.73
RAD9AQ99638 MED15P5-201ENST00000423150 992 ntBASIC19.62■□□□□ 0.73
RAD9AQ99638 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.62■□□□□ 0.73
RAD9AQ99638 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.62■□□□□ 0.73
RAD9AQ99638 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.62■□□□□ 0.73
RAD9AQ99638 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.62■□□□□ 0.73
RAD9AQ99638 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.62■□□□□ 0.73
RAD9AQ99638 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 HLA-J-201ENST00000462773 1622 ntBASIC19.62■□□□□ 0.73
RAD9AQ99638 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAD9AQ99638 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD9AQ99638 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD9AQ99638 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAD9AQ99638 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.61■□□□□ 0.73
RAD9AQ99638 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
RAD9AQ99638 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms