Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 GPR32P1-201ENST00000601788 811 ntBASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK5RAP1Q96SZ6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 TSPY22P-201ENST00000427496 604 ntBASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK5RAP1Q96SZ6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 IGHGP-201ENST00000390555 1178 ntBASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 ATP5G2P1-201ENST00000433580 426 ntBASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 TSSC2-201ENST00000450217 709 ntBASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC005332.3-201ENST00000589904 676 ntBASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC093458.2-201ENST00000623150 629 ntBASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK5RAP1Q96SZ6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 SDHAP2-201ENST00000455183 2001 ntBASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 Z83836.1-201ENST00000624605 1642 ntBASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK5RAP1Q96SZ6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 CHCHD2P8-201ENST00000429873 447 ntBASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 AC113404.2-201ENST00000507884 177 ntBASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 AL390719.2-201ENST00000606993 987 ntBASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 AL499627.1-201ENST00000569373 2188 ntBASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK5RAP1Q96SZ6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK5RAP1Q96SZ6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms