Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF558Q96NG5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 AC093484.2-201ENST00000580996 2166 ntBASIC19.56■□□□□ 0.72
ZNF558Q96NG5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF558Q96NG5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 AC006538.3-201ENST00000612495 578 ntBASIC19.55■□□□□ 0.72
ZNF558Q96NG5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF558Q96NG5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 KRT18P67-201ENST00000432816 1264 ntBASIC19.54■□□□□ 0.72
ZNF558Q96NG5 AF186996.4-201ENST00000467186 377 ntBASIC19.54■□□□□ 0.72
ZNF558Q96NG5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 AC007952.6-201ENST00000573168 2673 ntBASIC19.54■□□□□ 0.72
ZNF558Q96NG5 AC003957.1-201ENST00000625108 2673 ntBASIC19.54■□□□□ 0.72
ZNF558Q96NG5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF558Q96NG5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.53■□□□□ 0.72
ZNF558Q96NG5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms