Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.48■□□□□ 0.55
SIPA1Q96FS4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.47■□□□□ 0.55
SIPA1Q96FS4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.47■□□□□ 0.55
SIPA1Q96FS4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SIPA1Q96FS4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SIPA1Q96FS4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SIPA1Q96FS4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.46■□□□□ 0.54
SIPA1Q96FS4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 AL031008.1-201ENST00000619963 541 ntBASIC18.45■□□□□ 0.54
SIPA1Q96FS4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 AL161938.1-201ENST00000569833 2180 ntBASIC18.45■□□□□ 0.54
SIPA1Q96FS4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SIPA1Q96FS4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SIPA1Q96FS4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms