Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.78■□□□□ 0.44
RNF31Q96EP0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 AL512353.2-201ENST00000448759 1962 ntBASIC17.78■□□□□ 0.44
RNF31Q96EP0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
RNF31Q96EP0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF31Q96EP0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF31Q96EP0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF31Q96EP0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF31Q96EP0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RNF31Q96EP0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF31Q96EP0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF31Q96EP0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF31Q96EP0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 AC090340.1-201ENST00000620778 4980 ntBASIC17.76■□□□□ 0.43
RNF31Q96EP0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 KRT8P3-201ENST00000519669 1449 ntBASIC17.76■□□□□ 0.43
RNF31Q96EP0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 AC112497.1-201ENST00000624824 639 ntBASIC17.76■□□□□ 0.43
RNF31Q96EP0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF31Q96EP0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF31Q96EP0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms