Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AP000593.1-201ENST00000393668 712 ntBASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 MIR3180-5-201ENST00000583743 153 ntBASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SMARCC2Q8TAQ2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 AK4P3-201ENST00000418260 669 ntBASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 AC117947.1-201ENST00000427448 529 ntBASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 DUX4L26-201ENST00000489078 1255 ntBASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 COX11P1-201ENST00000489116 835 ntBASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 AC139887.4-201ENST00000607877 719 ntBASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC2Q8TAQ2 ESPNP-201ENST00000270691 2015 ntBASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC2Q8TAQ2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.58■■□□□ 1.04
SMARCC2Q8TAQ2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 NOC2LP2-201ENST00000407594 1944 ntBASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.57■■□□□ 1.04
SMARCC2Q8TAQ2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms