Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR3180-5-201ENST00000583743 153 ntBASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 AC010653.2-201ENST00000623505 997 ntBASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIMC1Q8NDZ2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 AC128688.1-201ENST00000487626 519 ntBASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 AC010203.1-204ENST00000548782 407 ntBASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SIMC1Q8NDZ2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 AC097493.4-201ENST00000641197 219 ntBASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 KRT18P22-201ENST00000402024 1347 ntBASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIMC1Q8NDZ2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms