Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARHGEF28Q8N1W1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
ARHGEF28Q8N1W1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ARHGEF28Q8N1W1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ARHGEF28Q8N1W1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ARHGEF28Q8N1W1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
ARHGEF28Q8N1W1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 KRT18P67-201ENST00000432816 1264 ntBASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 AP001005.1-201ENST00000571755 1248 ntBASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 AC008687.5-201ENST00000593746 558 ntBASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ARHGEF28Q8N1W1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 AC009154.2-201ENST00000621177 724 ntBASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 AC148477.8-201ENST00000624298 468 ntBASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ARHGEF28Q8N1W1 AC243591.1-201ENST00000452967 1364 ntBASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 AP001269.4-201ENST00000609611 512 ntBASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
ARHGEF28Q8N1W1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms