Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RNA5SP419-201ENST00000515908 135 ntBASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 AC009065.1-201ENST00000564055 1225 ntBASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 AL591684.3-201ENST00000605187 298 ntBASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 AC139530.3-201ENST00000620344 690 ntBASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEFF1Q8IYR6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 POM121L3P-201ENST00000419331 1163 ntBASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 AC117500.6-201ENST00000624871 588 ntBASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 AC068587.9-201ENST00000641814 219 ntBASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 FP475955.4-201ENST00000623131 1990 ntBASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEFF1Q8IYR6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 KRT89P-201ENST00000620027 1478 ntBASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 KRT18P13-201ENST00000400056 1290 ntBASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 BNIP3P18-201ENST00000593976 575 ntBASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEFF1Q8IYR6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 Z98044.1-201ENST00000632503 1764 ntBASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 AC093484.2-201ENST00000580996 2166 ntBASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 AL031284.1-201ENST00000419297 478 ntBASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 AC096582.2-201ENST00000510860 516 ntBASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 MIR5100-201ENST00000579544 119 ntBASIC18.27■□□□□ 0.52
TMEFF1Q8IYR6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms