Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC60Q8IWA6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.45■□□□□ 0.87
CCDC60Q8IWA6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 DRAXINP1-201ENST00000437611 948 ntBASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 KRT126P-201ENST00000549467 1181 ntBASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 AL353692.3-201ENST00000407031 1396 ntBASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CCDC60Q8IWA6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 AC004263.2-201ENST00000617183 678 ntBASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC60Q8IWA6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC60Q8IWA6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms