Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 RBM17P3-201ENST00000417687 1192 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 SCARNA2-201ENST00000458748 420 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 POLD2P1-201ENST00000511220 997 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 AC008687.5-201ENST00000593746 558 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 AL049840.3-201ENST00000602669 611 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 FAM215A-202ENST00000632077 792 ntBASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCP2Q5VXM1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 RPL13AP23-201ENST00000480739 586 ntBASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 AC073648.2-201ENST00000510116 352 ntBASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 PMS2P7-201ENST00000506558 1336 ntBASIC17.47■□□□□ 0.39
CDCP2Q5VXM1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 MIR149-201ENST00000384879 89 ntBASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 AC092865.5-201ENST00000545435 363 ntBASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 AC112777.1-201ENST00000540175 1423 ntBASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.46■□□□□ 0.39
CDCP2Q5VXM1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.46■□□□□ 0.38
CDCP2Q5VXM1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 HNRNPDP1-201ENST00000439535 754 ntBASIC17.45■□□□□ 0.38
CDCP2Q5VXM1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms