Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13DQ5THJ4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 AC011840.4-201ENST00000578471 627 ntBASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 MTDHP3-201ENST00000594186 672 ntBASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.37□□□□□ -0.43
VPS13DQ5THJ4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AC141586.3-201ENST00000562166 1838 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AC098831.1-202ENST00000438821 336 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AC007952.6-201ENST00000573168 2673 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AC003957.1-201ENST00000625108 2673 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 UNC93B6-202ENST00000528242 690 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AL024508.2-201ENST00000607749 1894 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 AL049812.1-201ENST00000432563 2267 ntBASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.36□□□□□ -0.43
VPS13DQ5THJ4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 RBM17P3-201ENST00000417687 1192 ntBASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SCARNA2-201ENST00000458748 420 ntBASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.35□□□□□ -0.43
VPS13DQ5THJ4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms