Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 KRT18P41-201ENST00000518924 1277 ntBASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 AC139887.4-201ENST00000607877 719 ntBASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 AC073592.3-201ENST00000625118 1834 ntBASIC20.6■□□□□ 0.89
HERC4Q5GLZ8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 TSPY5P-201ENST00000426936 936 ntBASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 FAM86EP-206ENST00000510506 987 ntBASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HERC4Q5GLZ8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 HMGA1P5-201ENST00000412453 271 ntBASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 AL691432.3-201ENST00000621860 400 ntBASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.58■□□□□ 0.89
HERC4Q5GLZ8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 MYLKP1-201ENST00000509077 1580 ntBASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 IER3-202ENST00000376377 1350 ntBASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HERC4Q5GLZ8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.57■□□□□ 0.88
HERC4Q5GLZ8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms