Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN20Q4JDL3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AL162741.1-201ENST00000565563 1558 ntBASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPN20Q4JDL3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 AC093677.2-201ENST00000600169 1863 ntBASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 AL441883.1-201ENST00000566170 1045 ntBASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 MIR3917-201ENST00000580971 93 ntBASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN20Q4JDL3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.39■□□□□ 0.7
PTPN20Q4JDL3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN20Q4JDL3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
PTPN20Q4JDL3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN20Q4JDL3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN20Q4JDL3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 COX11P1-201ENST00000489116 835 ntBASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 AL390961.4-201ENST00000623958 2535 ntBASIC19.39■□□□□ 0.69
PTPN20Q4JDL3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms