Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.22■□□□□ 0.03
SUPT4H1P63272 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 RCC2P3-201ENST00000418112 1537 ntBASIC15.22■□□□□ 0.03
SUPT4H1P63272 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SUPT4H1P63272 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SUPT4H1P63272 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 AL162430.1-201ENST00000480705 870 ntBASIC15.21■□□□□ 0.03
SUPT4H1P63272 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.21■□□□□ 0.03
SUPT4H1P63272 AC008687.6-201ENST00000596318 630 ntBASIC15.21■□□□□ 0.03
SUPT4H1P63272 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SUPT4H1P63272 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SUPT4H1P63272 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SUPT4H1P63272 AL023806.1-201ENST00000603994 1649 ntBASIC15.21■□□□□ 0.02
SUPT4H1P63272 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SUPT4H1P63272 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SUPT4H1P63272 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SUPT4H1P63272 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 GMCL1P1-201ENST00000463439 1581 ntBASIC15.2■□□□□ 0.02
SUPT4H1P63272 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 HTR7P1-202ENST00000624664 4411 ntBASIC15.2■□□□□ 0.02
SUPT4H1P63272 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 LINC00602-201ENST00000629776 2065 ntBASIC15.2■□□□□ 0.02
SUPT4H1P63272 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 SOX15-203ENST00000570788 1093 ntBASIC15.2■□□□□ 0.02
SUPT4H1P63272 MYC-209ENST00000641252 345 ntBASIC15.2■□□□□ 0.02
SUPT4H1P63272 AC073111.5-205ENST00000641717 521 ntBASIC15.2■□□□□ 0.02
SUPT4H1P63272 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SUPT4H1P63272 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SUPT4H1P63272 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms