Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN8P56748 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN8P56748 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN8P56748 PRORSD1P-201ENST00000295112 541 ntBASIC17.55■□□□□ 0.4
CLDN8P56748 UBE2SP1-201ENST00000450587 669 ntBASIC17.55■□□□□ 0.4
CLDN8P56748 TSPY20P-201ENST00000450910 630 ntBASIC17.55■□□□□ 0.4
CLDN8P56748 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN8P56748 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN8P56748 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN8P56748 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN8P56748 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN8P56748 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN8P56748 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN8P56748 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN8P56748 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN8P56748 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN8P56748 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN8P56748 GNAS-203ENST00000306120 1878 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 AP000997.3-201ENST00000623333 2250 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 AL096828.2-201ENST00000567259 1965 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN8P56748 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 AC012618.2-201ENST00000428058 849 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN8P56748 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 REXO1L10P-201ENST00000615707 1290 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 REXO1L12P-201ENST00000622156 912 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 AC113410.3-201ENST00000623366 203 ntBASIC17.54■□□□□ 0.4
CLDN8P56748 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CLDN8P56748 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN8P56748 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN8P56748 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 AC134043.2-201ENST00000624206 2238 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 AC036111.1-201ENST00000533973 1582 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 PHGDH-209ENST00000641074 1780 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN8P56748 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 AL163051.1-201ENST00000569214 1512 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.53■□□□□ 0.4
CLDN8P56748 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 CRYGFP-201ENST00000418459 633 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN8P56748 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN8P56748 MIR4674-201ENST00000582457 87 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 AC233702.5-201ENST00000584107 538 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CLDN8P56748 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.53■□□□□ 0.4
CLDN8P56748 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN8P56748 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN8P56748 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN8P56748 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms