Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BRCA2P51587 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRCA2P51587 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRCA2P51587 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRCA2P51587 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.58■□□□□ 0.89
BRCA2P51587 KRT18P27-201ENST00000427733 1299 ntBASIC20.58■□□□□ 0.88
BRCA2P51587 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.58■□□□□ 0.88
BRCA2P51587 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.58■□□□□ 0.88
BRCA2P51587 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.58■□□□□ 0.88
BRCA2P51587 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.58■□□□□ 0.88
BRCA2P51587 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCA2P51587 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCA2P51587 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCA2P51587 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRCA2P51587 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRCA2P51587 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.58■□□□□ 0.88
BRCA2P51587 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
BRCA2P51587 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.58■□□□□ 0.88
BRCA2P51587 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCA2P51587 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.57■□□□□ 0.88
BRCA2P51587 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.57■□□□□ 0.88
BRCA2P51587 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.57■□□□□ 0.88
BRCA2P51587 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCA2P51587 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCA2P51587 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCA2P51587 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
BRCA2P51587 MIR3180-4-201ENST00000582223 153 ntBASIC20.57■□□□□ 0.88
BRCA2P51587 AC092364.2-202ENST00000597012 1073 ntBASIC20.57■□□□□ 0.88
BRCA2P51587 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCA2P51587 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
BRCA2P51587 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 KRT89P-201ENST00000620027 1478 ntBASIC20.56■□□□□ 0.88
BRCA2P51587 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 AL645939.2-201ENST00000427340 991 ntBASIC20.56■□□□□ 0.88
BRCA2P51587 AC012645.4-201ENST00000610691 1061 ntBASIC20.56■□□□□ 0.88
BRCA2P51587 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.56■□□□□ 0.88
BRCA2P51587 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.56■□□□□ 0.88
BRCA2P51587 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCA2P51587 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCA2P51587 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCA2P51587 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCA2P51587 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.55■□□□□ 0.88
BRCA2P51587 AC009947.1-201ENST00000444350 727 ntBASIC20.55■□□□□ 0.88
BRCA2P51587 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.55■□□□□ 0.88
BRCA2P51587 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
BRCA2P51587 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
BRCA2P51587 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.55■□□□□ 0.88
BRCA2P51587 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.55■□□□□ 0.88
BRCA2P51587 AL096865.1-201ENST00000606796 927 ntBASIC20.55■□□□□ 0.88
BRCA2P51587 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
BRCA2P51587 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCA2P51587 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCA2P51587 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.55■□□□□ 0.88
BRCA2P51587 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.55■□□□□ 0.88
BRCA2P51587 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCA2P51587 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.55■□□□□ 0.88
BRCA2P51587 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.55■□□□□ 0.88
BRCA2P51587 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.55■□□□□ 0.88
BRCA2P51587 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.54■□□□□ 0.88
BRCA2P51587 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 MIR770-201ENST00000390219 98 ntBASIC20.54■□□□□ 0.88
BRCA2P51587 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.54■□□□□ 0.88
BRCA2P51587 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BRCA2P51587 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
BRCA2P51587 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms