Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CENPFP49454 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 AC092910.1-201ENST00000482027 1129 ntBASIC20.76■□□□□ 0.91
CENPFP49454 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.76■□□□□ 0.91
CENPFP49454 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.76■□□□□ 0.91
CENPFP49454 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 AC023274.1-201ENST00000418278 595 ntBASIC20.75■□□□□ 0.91
CENPFP49454 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.75■□□□□ 0.91
CENPFP49454 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.75■□□□□ 0.91
CENPFP49454 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 UNC93B6-202ENST00000528242 690 ntBASIC20.75■□□□□ 0.91
CENPFP49454 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.75■□□□□ 0.91
CENPFP49454 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CENPFP49454 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.75■□□□□ 0.91
CENPFP49454 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CENPFP49454 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.74■□□□□ 0.91
CENPFP49454 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 ALG1L5P-201ENST00000482043 771 ntBASIC20.74■□□□□ 0.91
CENPFP49454 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.74■□□□□ 0.91
CENPFP49454 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.74■□□□□ 0.91
CENPFP49454 MTDHP5-201ENST00000598980 586 ntBASIC20.74■□□□□ 0.91
CENPFP49454 AC239800.4-201ENST00000603712 296 ntBASIC20.74■□□□□ 0.91
CENPFP49454 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CENPFP49454 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CENPFP49454 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CENPFP49454 COX20P2-201ENST00000452636 358 ntBASIC20.74■□□□□ 0.91
CENPFP49454 AL138831.2-201ENST00000606564 490 ntBASIC20.74■□□□□ 0.91
CENPFP49454 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CENPFP49454 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CENPFP49454 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.74■□□□□ 0.91
CENPFP49454 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.74■□□□□ 0.91
CENPFP49454 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CENPFP49454 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.73■□□□□ 0.91
CENPFP49454 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.73■□□□□ 0.91
CENPFP49454 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.73■□□□□ 0.91
CENPFP49454 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.73■□□□□ 0.91
CENPFP49454 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.73■□□□□ 0.91
CENPFP49454 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.73■□□□□ 0.91
CENPFP49454 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CENPFP49454 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CENPFP49454 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.72■□□□□ 0.91
CENPFP49454 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.72■□□□□ 0.91
CENPFP49454 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.72■□□□□ 0.91
CENPFP49454 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 AL158211.5-201ENST00000623583 2518 ntBASIC20.72■□□□□ 0.91
CENPFP49454 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 RCN1P2-201ENST00000398357 915 ntBASIC20.72■□□□□ 0.91
CENPFP49454 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.72■□□□□ 0.91
CENPFP49454 MIR3180-4-201ENST00000582223 153 ntBASIC20.72■□□□□ 0.91
CENPFP49454 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.72■□□□□ 0.91
CENPFP49454 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.72■□□□□ 0.91
CENPFP49454 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CENPFP49454 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.72■□□□□ 0.91
CENPFP49454 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.72■□□□□ 0.91
CENPFP49454 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CENPFP49454 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.72■□□□□ 0.91
CENPFP49454 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.72■□□□□ 0.91
CENPFP49454 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.72■□□□□ 0.91
CENPFP49454 AC106028.4-201ENST00000614509 607 ntBASIC20.72■□□□□ 0.91
CENPFP49454 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms