Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD11P31277 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD11P31277 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HOXD11P31277 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 AL139094.1-201ENST00000405549 1188 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 TSPY12P-201ENST00000421279 868 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 AC007663.1-201ENST00000438948 1240 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
HOXD11P31277 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 THAP6-210ENST00000507557 542 ntTSL 4 BASIC19.64■□□□□ 0.73
HOXD11P31277 POLD2P1-201ENST00000511220 997 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 AC110775.1-201ENST00000513721 462 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC19.64■□□□□ 0.73
HOXD11P31277 AL136520.1-202ENST00000555494 763 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 AC091304.2-201ENST00000564639 760 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 AP001160.2-201ENST00000596071 487 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 AL121912.1-201ENST00000603683 238 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 AC003001.2-201ENST00000616294 831 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 AC055717.3-201ENST00000622967 595 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 AC068787.1-201ENST00000623908 691 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXD11P31277 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 AC120338.1-201ENST00000625074 1541 ntBASIC19.64■□□□□ 0.73
HOXD11P31277 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXD11P31277 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
HOXD11P31277 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXD11P31277 AC007375.3-201ENST00000600936 2314 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HOXD11P31277 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD11P31277 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD11P31277 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 AL035633.1-201ENST00000406139 838 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 RNU6-584P-201ENST00000410350 95 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HOXD11P31277 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXD11P31277 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 SLC25A1P2-201ENST00000430693 912 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.63■□□□□ 0.73
HOXD11P31277 AP003102.1-201ENST00000525638 661 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 SLC25A1P1-201ENST00000528351 927 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 AC005632.2-201ENST00000564271 828 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXD11P31277 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXD11P31277 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXD11P31277 AC010680.5-201ENST00000605021 463 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 AL133406.3-201ENST00000606817 541 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXD11P31277 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXD11P31277 AL049777.1-201ENST00000622740 518 ntBASIC19.63■□□□□ 0.73
HOXD11P31277 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXD11P31277 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXD11P31277 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXD11P31277 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 AL592494.2-201ENST00000425455 1548 ntBASIC19.62■□□□□ 0.73
HOXD11P31277 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD11P31277 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXD11P31277 AC073130.3-201ENST00000624389 2278 ntBASIC19.62■□□□□ 0.73
HOXD11P31277 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HOXD11P31277 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD11P31277 RPL30P16-201ENST00000419341 429 ntBASIC19.62■□□□□ 0.73
HOXD11P31277 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD11P31277 AC011506.1-201ENST00000474329 610 ntBASIC19.62■□□□□ 0.73
HOXD11P31277 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 AC096571.1-202ENST00000506634 735 ntBASIC19.62■□□□□ 0.73
HOXD11P31277 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD11P31277 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD11P31277 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms