Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AKR1C7P-201ENST00000305623 895 ntBASIC20.96■□□□□ 0.95
CNGA1P29973 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CNGA1P29973 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.96■□□□□ 0.95
CNGA1P29973 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
CNGA1P29973 TSPY12P-201ENST00000421279 868 ntBASIC20.96■□□□□ 0.95
CNGA1P29973 IGHV3-47-201ENST00000425060 335 ntBASIC20.96■□□□□ 0.95
CNGA1P29973 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CNGA1P29973 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.96■□□□□ 0.95
CNGA1P29973 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNGA1P29973 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.96■□□□□ 0.95
CNGA1P29973 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.96■□□□□ 0.95
CNGA1P29973 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNGA1P29973 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNGA1P29973 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
CNGA1P29973 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.95■□□□□ 0.94
CNGA1P29973 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CNGA1P29973 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 SAPCD2P3-201ENST00000455031 850 ntBASIC20.95■□□□□ 0.94
CNGA1P29973 VENTXP7-201ENST00000475503 772 ntBASIC20.95■□□□□ 0.94
CNGA1P29973 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CNGA1P29973 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.95■□□□□ 0.94
CNGA1P29973 AF228730.7-201ENST00000641842 219 ntBASIC20.95■□□□□ 0.94
CNGA1P29973 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CNGA1P29973 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.95■□□□□ 0.94
CNGA1P29973 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.95■□□□□ 0.94
CNGA1P29973 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.95■□□□□ 0.94
CNGA1P29973 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.95■□□□□ 0.94
CNGA1P29973 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNGA1P29973 NSUN5P1-202ENST00000421140 1535 ntBASIC20.94■□□□□ 0.94
CNGA1P29973 NSUN5P2-203ENST00000457352 1529 ntBASIC20.94■□□□□ 0.94
CNGA1P29973 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.94■□□□□ 0.94
CNGA1P29973 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.94■□□□□ 0.94
CNGA1P29973 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.94■□□□□ 0.94
CNGA1P29973 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 MIR564-202ENST00000385049 94 ntBASIC20.94■□□□□ 0.94
CNGA1P29973 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.94■□□□□ 0.94
CNGA1P29973 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.94■□□□□ 0.94
CNGA1P29973 AL671883.3-201ENST00000603274 991 ntBASIC20.94■□□□□ 0.94
CNGA1P29973 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.94■□□□□ 0.94
CNGA1P29973 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CNGA1P29973 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CNGA1P29973 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CNGA1P29973 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNGA1P29973 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CNGA1P29973 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.93■□□□□ 0.94
CNGA1P29973 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CNGA1P29973 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 IGHGP-201ENST00000390555 1178 ntBASIC20.93■□□□□ 0.94
CNGA1P29973 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.93■□□□□ 0.94
CNGA1P29973 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.93■□□□□ 0.94
CNGA1P29973 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.93■□□□□ 0.94
CNGA1P29973 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CNGA1P29973 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.93■□□□□ 0.94
CNGA1P29973 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.93■□□□□ 0.94
CNGA1P29973 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 AC064862.7-201ENST00000604520 867 ntBASIC20.93■□□□□ 0.94
CNGA1P29973 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.93■□□□□ 0.94
CNGA1P29973 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CNGA1P29973 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.93■□□□□ 0.94
CNGA1P29973 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.93■□□□□ 0.94
CNGA1P29973 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.93■□□□□ 0.94
CNGA1P29973 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.93■□□□□ 0.94
CNGA1P29973 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNGA1P29973 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.93■□□□□ 0.94
CNGA1P29973 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNGA1P29973 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms