Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL4P13236 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL4P13236 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CCL4P13236 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL4P13236 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL4P13236 BNIP3P18-201ENST00000593976 575 ntBASIC17.4■□□□□ 0.38
CCL4P13236 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL4P13236 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL4P13236 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL4P13236 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL4P13236 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.39■□□□□ 0.38
CCL4P13236 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCL4P13236 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCL4P13236 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.39■□□□□ 0.37
CCL4P13236 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL4P13236 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL4P13236 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 TP73-AS1-207ENST00000624167 988 ntBASIC17.39■□□□□ 0.37
CCL4P13236 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL4P13236 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL4P13236 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CCL4P13236 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL4P13236 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CCL4P13236 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 MIR149-201ENST00000384879 89 ntBASIC17.38■□□□□ 0.37
CCL4P13236 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 POM121L3P-201ENST00000419331 1163 ntBASIC17.38■□□□□ 0.37
CCL4P13236 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.38■□□□□ 0.37
CCL4P13236 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL4P13236 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL4P13236 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL4P13236 MIR5100-201ENST00000579544 119 ntBASIC17.37■□□□□ 0.37
CCL4P13236 AL591684.3-201ENST00000605187 298 ntBASIC17.37■□□□□ 0.37
CCL4P13236 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 AC083906.6-201ENST00000641366 219 ntBASIC17.37■□□□□ 0.37
CCL4P13236 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL4P13236 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL4P13236 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL4P13236 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL4P13236 AC096582.2-201ENST00000510860 516 ntBASIC17.36■□□□□ 0.37
CCL4P13236 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCL4P13236 AC120114.3-201ENST00000611923 658 ntBASIC17.36■□□□□ 0.37
CCL4P13236 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCL4P13236 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL4P13236 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
CCL4P13236 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms