Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM1P09493 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM1P09493 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
TPM1P09493 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
TPM1P09493 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 POU5F1P3-201ENST00000428824 1078 ntBASIC20.34■□□□□ 0.85
TPM1P09493 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TPM1P09493 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.34■□□□□ 0.85
TPM1P09493 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 ESPNP-201ENST00000270691 2015 ntBASIC20.34■□□□□ 0.85
TPM1P09493 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM1P09493 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TPM1P09493 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TPM1P09493 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.34■□□□□ 0.85
TPM1P09493 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TPM1P09493 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.33■□□□□ 0.85
TPM1P09493 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TPM1P09493 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.85
TPM1P09493 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.33■□□□□ 0.85
TPM1P09493 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TPM1P09493 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.33■□□□□ 0.85
TPM1P09493 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.33■□□□□ 0.85
TPM1P09493 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.33■□□□□ 0.85
TPM1P09493 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TPM1P09493 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TPM1P09493 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.33■□□□□ 0.84
TPM1P09493 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TPM1P09493 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TPM1P09493 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.33■□□□□ 0.84
TPM1P09493 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TPM1P09493 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TPM1P09493 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TPM1P09493 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TPM1P09493 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TPM1P09493 AL357033.4-201ENST00000617703 1807 ntBASIC20.32■□□□□ 0.84
TPM1P09493 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.32■□□□□ 0.84
TPM1P09493 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.32■□□□□ 0.84
TPM1P09493 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TPM1P09493 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
TPM1P09493 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM1P09493 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM1P09493 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM1P09493 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM1P09493 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM1P09493 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.31■□□□□ 0.84
TPM1P09493 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM1P09493 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.31■□□□□ 0.84
TPM1P09493 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM1P09493 KRT8P11-201ENST00000409686 1436 ntBASIC20.31■□□□□ 0.84
TPM1P09493 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TPM1P09493 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM1P09493 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM1P09493 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM1P09493 SLC25A6P5-201ENST00000435663 894 ntBASIC20.31■□□□□ 0.84
TPM1P09493 AC069152.1-201ENST00000438030 544 ntBASIC20.31■□□□□ 0.84
TPM1P09493 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms