Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 PGAM5P1-201ENST00000518923 814 ntBASIC19.47■□□□□ 0.71
RB1P06400 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.47■□□□□ 0.71
RB1P06400 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.47■□□□□ 0.71
RB1P06400 AC027601.4-201ENST00000611259 610 ntBASIC19.47■□□□□ 0.71
RB1P06400 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RB1P06400 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.47■□□□□ 0.71
RB1P06400 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RB1P06400 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
RB1P06400 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RB1P06400 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RB1P06400 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.46■□□□□ 0.71
RB1P06400 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RB1P06400 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
RB1P06400 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.46■□□□□ 0.71
RB1P06400 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.46■□□□□ 0.71
RB1P06400 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.46■□□□□ 0.71
RB1P06400 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.46■□□□□ 0.71
RB1P06400 AP001269.4-201ENST00000609611 512 ntBASIC19.46■□□□□ 0.71
RB1P06400 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 FAM197Y3-203ENST00000618346 717 ntBASIC19.46■□□□□ 0.71
RB1P06400 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.46■□□□□ 0.71
RB1P06400 INTS4P1-201ENST00000438455 1935 ntBASIC19.46■□□□□ 0.71
RB1P06400 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.46■□□□□ 0.71
RB1P06400 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.46■□□□□ 0.71
RB1P06400 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.46■□□□□ 0.71
RB1P06400 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RB1P06400 AC112907.3-201ENST00000577781 2400 ntBASIC19.45■□□□□ 0.7
RB1P06400 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.45■□□□□ 0.7
RB1P06400 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.45■□□□□ 0.7
RB1P06400 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.45■□□□□ 0.7
RB1P06400 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.45■□□□□ 0.7
RB1P06400 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.45■□□□□ 0.7
RB1P06400 IGHV3-22-201ENST00000520721 359 ntBASIC19.45■□□□□ 0.7
RB1P06400 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.45■□□□□ 0.7
RB1P06400 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RB1P06400 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
RB1P06400 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
RB1P06400 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 AP005117.1-201ENST00000584346 1413 ntBASIC19.44■□□□□ 0.7
RB1P06400 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 AL591424.1-201ENST00000442569 1213 ntBASIC19.44■□□□□ 0.7
RB1P06400 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.44■□□□□ 0.7
RB1P06400 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.44■□□□□ 0.7
RB1P06400 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.44■□□□□ 0.7
RB1P06400 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.44■□□□□ 0.7
RB1P06400 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RB1P06400 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.44■□□□□ 0.7
RB1P06400 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RB1P06400 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RB1P06400 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms