Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFAP04085 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.23■□□□□ 0.35
PDGFAP04085 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.23■□□□□ 0.35
PDGFAP04085 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 AC079781.3-201ENST00000449110 356 ntBASIC17.23■□□□□ 0.35
PDGFAP04085 AP000867.3-201ENST00000524675 377 ntBASIC17.23■□□□□ 0.35
PDGFAP04085 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.23■□□□□ 0.35
PDGFAP04085 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PDGFAP04085 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.23■□□□□ 0.35
PDGFAP04085 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDGFAP04085 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
PDGFAP04085 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PDGFAP04085 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDGFAP04085 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFAP04085 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 AC099778.1-201ENST00000568593 1911 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDGFAP04085 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFAP04085 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PDGFAP04085 LINC00265-3P-201ENST00000447588 903 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.22■□□□□ 0.35
PDGFAP04085 MIR3917-201ENST00000580971 93 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFAP04085 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.22■□□□□ 0.35
PDGFAP04085 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.22■□□□□ 0.35
PDGFAP04085 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDGFAP04085 AC112497.1-201ENST00000624824 639 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFAP04085 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 AC112907.3-201ENST00000577781 2400 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.22■□□□□ 0.35
PDGFAP04085 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.22■□□□□ 0.35
PDGFAP04085 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PDGFAP04085 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDGFAP04085 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
PDGFAP04085 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDGFAP04085 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFAP04085 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
PDGFAP04085 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFAP04085 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms