Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN1O95832 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN1O95832 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN1O95832 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 AC005332.3-201ENST00000589904 676 ntBASIC16.46■□□□□ 0.23
CLDN1O95832 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN1O95832 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 AC148477.8-201ENST00000624298 468 ntBASIC16.46■□□□□ 0.23
CLDN1O95832 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CLDN1O95832 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN1O95832 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN1O95832 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN1O95832 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN1O95832 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN1O95832 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN1O95832 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN1O95832 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLDN1O95832 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLDN1O95832 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN1O95832 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN1O95832 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 AL023284.2-201ENST00000405850 579 ntBASIC16.45■□□□□ 0.22
CLDN1O95832 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 AC073648.2-201ENST00000510116 352 ntBASIC16.45■□□□□ 0.22
CLDN1O95832 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN1O95832 AC243591.1-201ENST00000452967 1364 ntBASIC16.45■□□□□ 0.22
CLDN1O95832 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLDN1O95832 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN1O95832 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN1O95832 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
CLDN1O95832 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN1O95832 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN1O95832 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN1O95832 MIR564-202ENST00000385049 94 ntBASIC16.44■□□□□ 0.22
CLDN1O95832 NUS1P2-201ENST00000417358 873 ntBASIC16.44■□□□□ 0.22
CLDN1O95832 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN1O95832 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 AC055717.3-201ENST00000622967 595 ntBASIC16.44■□□□□ 0.22
CLDN1O95832 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN1O95832 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN1O95832 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN1O95832 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN1O95832 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN1O95832 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms