Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.69■□□□□ 0.9
GGPS1O95749 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GGPS1O95749 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.68■□□□□ 0.9
GGPS1O95749 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
GGPS1O95749 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.68■□□□□ 0.9
GGPS1O95749 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.68■□□□□ 0.9
GGPS1O95749 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.68■□□□□ 0.9
GGPS1O95749 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.68■□□□□ 0.9
GGPS1O95749 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
GGPS1O95749 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.68■□□□□ 0.9
GGPS1O95749 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.68■□□□□ 0.9
GGPS1O95749 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GGPS1O95749 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.68■□□□□ 0.9
GGPS1O95749 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.67■□□□□ 0.9
GGPS1O95749 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.67■□□□□ 0.9
GGPS1O95749 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.67■□□□□ 0.9
GGPS1O95749 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GGPS1O95749 AC026396.1-201ENST00000419388 421 ntBASIC20.67■□□□□ 0.9
GGPS1O95749 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.67■□□□□ 0.9
GGPS1O95749 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 NUS1P1-201ENST00000446295 882 ntBASIC20.67■□□□□ 0.9
GGPS1O95749 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.67■□□□□ 0.9
GGPS1O95749 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.67■□□□□ 0.9
GGPS1O95749 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.67■□□□□ 0.9
GGPS1O95749 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.67■□□□□ 0.9
GGPS1O95749 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.67■□□□□ 0.9
GGPS1O95749 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.67■□□□□ 0.9
GGPS1O95749 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
GGPS1O95749 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.67■□□□□ 0.9
GGPS1O95749 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.67■□□□□ 0.9
GGPS1O95749 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 AC099343.3-201ENST00000605834 2503 ntBASIC20.67■□□□□ 0.9
GGPS1O95749 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GGPS1O95749 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GGPS1O95749 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.66■□□□□ 0.9
GGPS1O95749 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GGPS1O95749 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.66■□□□□ 0.9
GGPS1O95749 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.66■□□□□ 0.9
GGPS1O95749 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.66■□□□□ 0.9
GGPS1O95749 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.66■□□□□ 0.9
GGPS1O95749 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.66■□□□□ 0.9
GGPS1O95749 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.66■□□□□ 0.9
GGPS1O95749 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.66■□□□□ 0.9
GGPS1O95749 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GGPS1O95749 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
GGPS1O95749 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GGPS1O95749 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.65■□□□□ 0.9
GGPS1O95749 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GGPS1O95749 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 KRT89P-201ENST00000620027 1478 ntBASIC20.65■□□□□ 0.9
GGPS1O95749 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GGPS1O95749 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.65■□□□□ 0.9
GGPS1O95749 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GGPS1O95749 UNC93B7-201ENST00000509439 705 ntBASIC20.65■□□□□ 0.9
GGPS1O95749 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms