Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UBFD1O14562 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
UBFD1O14562 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
UBFD1O14562 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 AC098590.1-201ENST00000468126 897 ntBASIC17.91■□□□□ 0.46
UBFD1O14562 AC097488.1-201ENST00000507834 756 ntBASIC17.91■□□□□ 0.46
UBFD1O14562 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.91■□□□□ 0.46
UBFD1O14562 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.91■□□□□ 0.46
UBFD1O14562 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UBFD1O14562 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.91■□□□□ 0.46
UBFD1O14562 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UBFD1O14562 SDHAP2-201ENST00000455183 2001 ntBASIC17.91■□□□□ 0.46
UBFD1O14562 GMCL1P1-201ENST00000463439 1581 ntBASIC17.91■□□□□ 0.46
UBFD1O14562 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBFD1O14562 GNAS-203ENST00000306120 1878 ntBASIC17.9■□□□□ 0.46
UBFD1O14562 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBFD1O14562 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.9■□□□□ 0.46
UBFD1O14562 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 FLJ13224-201ENST00000313737 1514 ntBASIC17.9■□□□□ 0.46
UBFD1O14562 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UBFD1O14562 KRT18P29-201ENST00000397031 1267 ntBASIC17.9■□□□□ 0.46
UBFD1O14562 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
UBFD1O14562 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.9■□□□□ 0.46
UBFD1O14562 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.9■□□□□ 0.46
UBFD1O14562 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.9■□□□□ 0.46
UBFD1O14562 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.9■□□□□ 0.46
UBFD1O14562 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBFD1O14562 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.9■□□□□ 0.46
UBFD1O14562 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBFD1O14562 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBFD1O14562 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBFD1O14562 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.89■□□□□ 0.46
UBFD1O14562 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.89■□□□□ 0.46
UBFD1O14562 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.89■□□□□ 0.45
UBFD1O14562 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.89■□□□□ 0.45
UBFD1O14562 RPS2P55-201ENST00000397318 883 ntBASIC17.89■□□□□ 0.45
UBFD1O14562 AC107956.1-201ENST00000494359 873 ntBASIC17.89■□□□□ 0.45
UBFD1O14562 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.89■□□□□ 0.45
UBFD1O14562 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
UBFD1O14562 REXO1L10P-201ENST00000615707 1290 ntBASIC17.89■□□□□ 0.45
UBFD1O14562 REXO1L12P-201ENST00000622156 912 ntBASIC17.89■□□□□ 0.45
UBFD1O14562 AC113410.3-201ENST00000623366 203 ntBASIC17.89■□□□□ 0.45
UBFD1O14562 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.89■□□□□ 0.45
UBFD1O14562 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
UBFD1O14562 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBFD1O14562 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.89■□□□□ 0.45
UBFD1O14562 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms