Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
SOX1O00570 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.56■□□□□ 0.72
SOX1O00570 AC073621.1-201ENST00000392730 636 ntBASIC19.56■□□□□ 0.72
SOX1O00570 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SOX1O00570 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
SOX1O00570 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SOX1O00570 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.56■□□□□ 0.72
SOX1O00570 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.56■□□□□ 0.72
SOX1O00570 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.56■□□□□ 0.72
SOX1O00570 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.56■□□□□ 0.72
SOX1O00570 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.56■□□□□ 0.72
SOX1O00570 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 AF106564.1-201ENST00000607058 2553 ntBASIC19.56■□□□□ 0.72
SOX1O00570 AC009237.14-201ENST00000609975 1594 ntBASIC19.56■□□□□ 0.72
SOX1O00570 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SOX1O00570 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.56■□□□□ 0.72
SOX1O00570 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.56■□□□□ 0.72
SOX1O00570 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.56■□□□□ 0.72
SOX1O00570 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOX1O00570 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 AC034236.2-201ENST00000606662 1610 ntBASIC19.55■□□□□ 0.72
SOX1O00570 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SOX1O00570 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SOX1O00570 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX1O00570 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX1O00570 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SOX1O00570 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SOX1O00570 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX1O00570 AC068472.1-201ENST00000474589 881 ntBASIC19.55■□□□□ 0.72
SOX1O00570 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.55■□□□□ 0.72
SOX1O00570 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 PDPK2P-202ENST00000562415 1191 ntBASIC19.55■□□□□ 0.72
SOX1O00570 AL606495.2-201ENST00000605867 535 ntBASIC19.55■□□□□ 0.72
SOX1O00570 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SOX1O00570 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SOX1O00570 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX1O00570 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.55■□□□□ 0.72
SOX1O00570 FBXW4P1-201ENST00000426721 2239 ntBASIC19.55■□□□□ 0.72
SOX1O00570 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX1O00570 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.54■□□□□ 0.72
SOX1O00570 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 OR8S1-201ENST00000310194 1080 ntBASIC19.54■□□□□ 0.72
SOX1O00570 AC236430.1-201ENST00000402231 743 ntBASIC19.54■□□□□ 0.72
SOX1O00570 AP000344.2-201ENST00000512987 629 ntBASIC19.54■□□□□ 0.72
SOX1O00570 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.54■□□□□ 0.72
SOX1O00570 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.54■□□□□ 0.72
SOX1O00570 AC093520.2-201ENST00000561830 333 ntBASIC19.54■□□□□ 0.72
SOX1O00570 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX1O00570 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX1O00570 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SOX1O00570 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SOX1O00570 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX1O00570 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SOX1O00570 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX1O00570 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX1O00570 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.53■□□□□ 0.72
SOX1O00570 AC109322.1-201ENST00000524499 1264 ntBASIC19.53■□□□□ 0.72
SOX1O00570 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX1O00570 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX1O00570 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 AL359881.2-201ENST00000602973 570 ntBASIC19.53■□□□□ 0.72
SOX1O00570 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SOX1O00570 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX1O00570 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX1O00570 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX1O00570 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.53■□□□□ 0.72
SOX1O00570 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX1O00570 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SOX1O00570 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.52■□□□□ 0.72
SOX1O00570 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.52■□□□□ 0.72
SOX1O00570 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SOX1O00570 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX1O00570 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms